Expansion_gene_plot — Expansion_gene

Show smooth plots of genes as a function of buffer distance at different angles.

Usage

Expansion_gene_plot(
  st_obj,
  CellTopic,
  gene,
  meta.col = "CellTopic",
  angle = 90,
  parts = 1,
  plot = TRUE,
  cols = NULL
)

st_obj: A Seurat object.
CellTopic: A character of which CellTopic to be chosen.
gene: A vector contains one or more genes for display
meta.col: A character of which meta.data to be chosen. Default is "CellTopic".
angle: A numeric indicates the starting angle. Default is 90, which means directly above.
parts: A number indicates that the angle needs to be divided into several equal parts.
plot: Logical indicating if to display the result plot or just data for plotting. Default is TRUE.
cols: A vector of colors used for plot.

If plot = TRUE, return smooth plots of genes as a function of buffer distance at different angles. If plot = FALSE, return the data for plotting.