Calculate the proportion of transcripts mapping to mitochondrial genes

Source: R/QualityControl.R

Calculate the proportion of transcripts mapping to mitochondrial genes

CalMTpercent(SeuratObj, by = "use_internal_data")

Arguments

SeuratObj

Seurat object
by

use_internal_data AnnotationHub biomaRt

Value

Seurat object

Examples

if (FALSE) {
SeuratObj <- CalMTpercent(SeuratObj, by = 'use_internal_data')
SeuratObj <- CalMTpercent(SeuratObj, by = 'AnnotationHub')
SeuratObj <- CalMTpercent(SeuratObj, by = 'biomaRt')
}