word cloud of top terms of topic

wordcloud_topic(betaDF, pws, topic, topn = 20)

wordcloud_topic_3D(betaDF, pws, topic, topn = 20)

Arguments

betaDF	topic~term probability data.frame
pws	named vector, pathway description with ID as names
topic	topic to draw
topn	top n terms of topic

Examples

if (FALSE) {
ldaOut <- SeuratObj@misc$ldaOut
betaDF <- tidytext::tidy(ldaOut, matrix = "beta")
pws <- ID2Description(SeuratObj, by = "GO")
wordcloud_topic(betaDF, pws, topic=1, topn=20)
wordcloud_topic_3D(betaDF, pws, topic=1, topn=20)
}