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Dimension reduction plot showing cluster enrichment and TF expression

Source: R/MINIEX_visualization.R
enrich_exp_scatter.Rd

Dimension reduction plot showing cluster enrichment and TF expression

Usage

enrich_exp_scatter(SeuratObj, MINIEXouputPath, gene, reduction = "umap")

Arguments

SeuratObj

Seurat object

MINIEXouputPath

output path of MINI-EX.

gene

TF to show

reduction

umap or tsne

Examples

if (FALSE) {
enrich_exp_scatter(SeuratObj, MINIEXouputPath="regulons_output", gene = 'AT2G40750')
}