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pre-process original PMET output and filter with PPI information

Source: R/PMET_analysis.R
processPMET.Rd

pre-process original PMET output and filter with PPI information

Usage

processPMET(PMETresult, PPIinfo = NULL, species = "Arabidopsis thaliana")

Arguments

PMETresult

path of original PMET output

PPIinfo

protein-protein interaction (PPI) information

species

species; currently Arabidopsis thaliana or Oryza sativa or Zea mays are supported.

Examples

if (FALSE) {
PMETresult <- processPMET(PMETresult = "output.txt")
}