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Dimension reduction plot showing regulon activity and TF expression

Source: R/GRN_visualization.R
ras_exp_scatter.Rd

Dimension reduction plot showing regulon activity and TF expression

Usage

ras_exp_scatter(SeuratObj, rasMat, gene, reduction = "umap")

Arguments

SeuratObj

Seurat object

rasMat

matrix of regulon activity score(RAS) in each cell

gene

TF to show

reduction

umap or tsne