Network diagram showing targets of each regulon — targets_MINIEX • scPlant

Network diagram showing targets of each regulon inferred by MINI-EX.

Usage

targets_MINIEX(
  MINIEXouputPath,
  cluster = NULL,
  regulons = NULL,
  tf.size = 7,
  target.size = 4,
  tf.label.cex = 1,
  target.label.cex = 0.5
)

Arguments

MINIEXouputPath: output path of MINI-EX.
cluster: which cluster to show.
regulons: regulons to show.
tf.size: size of TF nodes
target.size: size of target nodes
tf.label.cex: label size of TF nodes
target.label.cex: label size of target nodes

Examples

if (FALSE) {
targets_MINIEX(MINIEXouputPath="regulons_output", cluster = 1,
               regulons = c("AT4G25490", "AT3G58710"))
}