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Network diagram showing top regulons of each cluster

Source: R/MINIEX_visualization.R
topRegulons_MINIEX.Rd

Network diagram showing top regulons of each cluster according to Borda ranking.

Usage

topRegulons_MINIEX(
  MINIEXouputPath,
  topn = 5,
  from.size = 7,
  to.size = 3,
  from.label.cex = 1,
  to.label.cex = 0.5
)

Arguments

MINIEXouputPath

output path of MINI-EX.

topn

number of top regulons to draw

from.size

size of 'cluster' nodes

to.size

size of 'regulon' nodes

from.label.cex

label size of 'cluster' nodes

to.label.cex

label size of 'regulon' nodes

Examples

if (FALSE) {
topRegulons_MINIEX(MINIEXouputPath="regulons_output", topn = 5)
}